Projects

Open source software has been at the heart of everything I have done for most of my career.

Below are some of the key projects that I've been involved with.

MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report

nf-core
A community effort to collect a curated set of analysis pipelines built using Nextflow

Nextflow
Data-driven computational pipelines

SRA Explorer
Mini web application to explore the NCBI SRA. Generates SRA/FastQ download URLs

Cluster Flow
Archived
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments

Labrador
Archived
A web based tool to manage and automate the processing of publicly available datasets

Personal projects

Hobby projects are one of the ways that I experiment and learn new things. I generally only build what I need, and sometimes something useful comes out.

Parking Alert
Remember where your car is parked and get automated alerts when you need to move it.